BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E07SP1|AL425877
(781 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1776 1540 0.0
>3x_Contig1776
Length = 26138
Score = 1540 bits (775), Expect = 0.0
Identities = 778/781 (99%)
Strand = Plus / Minus
Query: 1 atcattacaaaaaatcgtggaaattttaaatgctttaactgacacacaagcttccgctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9425 atcattacaaaaaatcgtggaaattttaaatgctttaactgacacacaagcttccgctat 9366
Query: 61 cagtattaataaacagtcgattcctgaatttttgacccatttccaatgggattcaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9365 cagtattaataaacagtcgattcctgaatttttgacccatttccaatgggattcaagaaa 9306
Query: 121 gttcaagcttgaaaaatctgtgaaagagttgattcacgatttatctatagaatccttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9305 gttcaagcttgaaaaatctgtgaaagagttgattcacgatttatctatagaatccttcca 9246
Query: 181 attggatgcagatgtaagatcgacttattcaaacyacaataatgcyaagtccaacttcgc 240
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 9245 attggatgcagatgtaagatcgacttattcaaactacaataatgctaagtccaacttcgc 9186
Query: 241 agctgccgaaagaaagaaaactggtgatttgtcagtaagatcattgcatgatattgtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9185 agctgccgaaagaaagaaaactggtgatttgtcagtaagatcattgcatgatattgtgaa 9126
Query: 301 ggctgaagatttcattttaaacagtgaatatttgaccactgtattggtagcagtgcccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9125 ggctgaagatttcattttaaacagtgaatatttgaccactgtattggtagcagtgcccaa 9066
Query: 361 gaccttgaaacaggatttcgagaagcattacgagacattggcagagaaagtggtaccggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9065 gaccttgaaacaggatttcgagaagcattacgagacattggcagagaaagtggtaccggg 9006
Query: 421 ttcagcaacggtgttgaaacaagatgacgagtttattctttataacgtccaccttttcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9005 ttcagcaacggtgttgaaacaagatgacgagtttattctttataacgtccaccttttcaa 8946
Query: 481 aaagtttcaacacgatttccaaaacgcctgcmgagaaagaaaatacattccacgtgactt 540
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 8945 aaagtttcaacacgatttccaaaacgcctgcagagaaagaaaatacattccacgtgactt 8886
Query: 541 tgcctattcagaagagttaattgatcagttgaaaaaagaacatgatacagccgccagcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8885 tgcctattcagaagagttaattgatcagttgaaaaaagaacatgatacagccgccagcca 8826
Query: 601 agagcaaagtttacgtgtccaattgattagattggccaagactgctttccaagacgtgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8825 agagcaaagtttacgtgtccaattgattagattggccaagactgctttccaagacgtgtt 8766
Query: 661 cgtcaattggctgcacatcaaggctttacgtgtctacgtcgagagtgttttgcgttatgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8765 cgtcaattggctgcacatcaaggctttacgtgtctacgtcgagagtgttttgcgttatgg 8706
Query: 721 tttaccgccattctttctaacgaaaataattgcagttcctcccaagcaactatctgcatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8705 tttaccgccattctttctaacgaaaataattgcagttcctcccaagcaactatctgcatg 8646
Query: 781 c 781
|
Sbjct: 8645 c 8645
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6516
Number of Sequences: 1807
Number of extensions: 6516
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 781
length of database: 10,358,551
effective HSP length: 16
effective length of query: 765
effective length of database: 10,329,639
effective search space: 7902173835
effective search space used: 7902173835
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)